Quantum Mechanics – Molecular Structure
Jeong Won Kang
Department of Chemical Engineering Korea University
Applied Statistical Mechanics Lecture Note - 4
Subjects
Structure of Complex Atoms - Continued
Molecular Structure
Structure of Complex Atoms
- Continued
The Spectra of Complex Atoms
The spectra of atoms rapidly become very
complicated as the number of electrons increases.
Spectra of an atom : The atom undergoes transition with a change of energy; ΔE = hν
Gives information about the energies of electron
However, the actual energy levels are not given solely by the energies of orbitals
Electron-Electron interactions
Measuring Ionization Energy (H atoms)
The plot of wave numbers vs. 1/n2 gives the ionization energy for hydrogen atoms
2 2
n R hc
I E I
hc E n
R c
h E
E E
H lower
lower H
lower
−
=
=
−
−
=
=
=
−
= Δ
ν ν ν
ν
Slope = I
Quantum defects and ionization energies
Energy levels of many-electron atoms do not vary as 1/n2
The outermost electron
Experience slightly more charge than 1e
Other Z-1 atoms cancel the charge slightly lower than 1
Quantum Defect (δ): empirical quantity
2 2 2
) (
n R hc
I n E hcR
n E hcRH
−
=
− −
=
−
=
ν
δ
Rydberg state
Pauli exclusion principle and the spins
Palui exclusion principle
“ No more than two electrons may occupy any given orbital and, if two occupy one orbital, then their spin must be paired “
“ When label of any two identical fermions are
exchanged, the total wavefunction changes sign. When the label of any two identical bosons are exchanged, the total wavefunction retain its sign “
Pauli exclusion principle and the spins
Two electrons (fermions) occupy an orbital Ψ then ;
Total Wave function = (orbital wave function)*(spin wave function) )
1 , 2 ( )
2 , 1
( = −Ψ Ψ
) 2 ( ) 1 ( α α
) 2 ( ) 1 ( ψ ψ
) 2 ( ) 1 ( β
α α(2)β(1) β(1)β(2) four possibility
{ }
{ (1) (2) (1) (2)}
) 2 / 1 ( ) 2 , 1 (
) 2 ( ) 1 ( )
2 ( ) 1 ( ) 2 / 1 ( ) 2 , 1 (
2 / 1
2 / 1
α β β
α σ
α β β
α σ
−
=
+
=
− +
We cannot tell which one is α and β
Normalized Linear Combination of two spin wave functions
) 2 ( ) 1 ( ) 2 ( ) 1 (
) 2 , 1 ( ) 2 ( ) 1 (
) 2 , 1 ( ) 2 ( ) 1 (
) 2 ( ) 1 ( ) 2 ( ) 1 (
β β ψ
ψ
σ ψ
ψ
σ ψ
ψ
α α ψ
ψ
− +
Pauli exclusion principle and the spins
) 2 ( ) 1 ( ) 2 ( ) 1 (
) 2 , 1 ( ) 2 ( ) 1 (
) 2 , 1 ( ) 2 ( ) 1 (
) 2 ( ) 1 ( ) 2 ( ) 1 (
β β ψ
ψ
σ ψ
ψ
σ ψ
ψ
α α ψ
ψ
− +
) 1 , 2 ( )
2 , 1
( = −Ψ Ψ
{ }
{ (1) (2) (1) (2)} (2,1)
) 2 / 1 ( ) 2 , 1 (
) 1 , 2 ( )
2 ( ) 1 ( )
2 ( ) 1 ( ) 2 / 1 ( ) 2 , 1 (
2 / 1
2 / 1
−
−
+ +
−
=
−
=
= +
=
σ α
β β
α σ
σ α
β β
α σ
Requirement :
) 1 , 2 ( )
2 , 1 (
) 1 , 2 ( )
2 , 1 (
) 1 , 2 ( )
2 , 1 (
) 1 , 2 ( )
2 , 1 (
Ψ
= Ψ
Ψ
−
= Ψ
Ψ
= Ψ
Ψ
= Ψ
) 2 , 1 ( ) 2 ( ) 1
( ψ σ−
ψ Only one acceptable
Singlet and Triplet State
Excited State of He atom
1s2 1s1 2s1
The two electrons need not to be paired
Singlet : paired spin arrangement
Triplet : parallel spin arrangement
Hund’s principle : triplet states generally lie lower than triplet state )
2 ( ) 1 ( α α
) 2 ( ) 1 ( β β
{ (1) (2) (1) (2)}
) 2 / 1 ( ) 2 , 1
( 1/2 α β β α
σ+ = +
{ (1) (2) (1) (2)}
) 2 / 1 ( ) 2 , 1
( 1/2 α β β α
σ− = −
Spectrum of atomic Helium
Spectrum of He atom is more complicated than H atom
Only one electron is excited
• Excitation of two electrons require more energy than ionization energy
No transitions take place between singlet and triplet states
• Behave like two species
Spin-Orbit Coupling
Electron spins has a further implication for energies of atoms when l > 0 ( finite orbital angular momentum )
(spin magnetic momentum) + (magnetic moment doe to orbital angular momentum) spin-orbit coupling
2 + 1
= l j
Parallel high angular momentum
Opposed low angular momentum
2
− 1
= l j
Spin-orbit coupling
When l=2
Spin-Orbit Coupling constant (A)
Dependence of spin-orbit interaction on the value of j
2 3 2 1
2 5 2 1
=
−
=
= +
= l j
l j
)) 1 ( ) 1 ( ) 1 ( 2 (
1
,
, = hcA j j+ −l l + −s s+
El j s
Spin-Orbit Coupling
Spin-orbit coupling depends on the nuclear charge
The greater the nucleus charge the stronger spin-orbit coupling
Very small in H , very large in Pb
Fine structure
Two spectral lines are observed
The structure in a spectrum due to spin- orbit coupling
Ex) Na (street light)
Term symbols and selection rules
Skip…
Molecular Structure
Topics
Valence-Bond Theory
Molecular Orbital Theory
Born-Oppenheimer approximation
Assumption
The nuclei is fixed at arbitrary location
H2 molecule
• Nuclei move about 1 pm
• Electrons move about 1000 pm
Use
different separation
solve Schrodinger equation
Energy of molecules vary with bond length
Equilibrium bond length (Re)
Bond Dissociation energy (De)
Structure Prediction, Property Estimation
Valence-Bond Theory
Consider H2 molecule
If electron 1 is on atom A and electron 2 is on atom B
) ( )
( 1 1 1
1 r r
A
A H S
S
H ψ
ψ ψ =
) 2 ( ) 1 ( B
= A
ψ ψ = A(2)B(1) ) 1 ( ) 2 ( )
2 ( ) 1
( B A B
A ±
ψ =
) 1 ( ) 2 ( )
2 ( ) 1
( B A B
A +
ψ =
Simple notation
Linear combination of wave functions
Lower energy
σ - bond
Cylindrical symmetry around internuclear axis
Rambles s-orbital : called sigma-bond
Zero angular momentum around internuclear axis
Molecular potential energy
Spin : spin paring
According to Pauli principle spin must be paired
π-bond
Essence of valence-bond theory
Pairing of the electrons
Accumulation of electron density in the internulear region
N2 atom
1
px 1
py
1 1 1
22 2 2
2s px py pz
1
pz σ−bond
π−bond
Cannot form σ-bond not symmetrical around internuclear axis
Water molecule
1 1
2
22 2 2
2s px py pz
Bond angle : 90 degree
Experimental 104.5 degree ! Two σ−bonds
Promotion
CH4 molecule
cannot be explained by valence-bond theory
only two electrons can form bonds
Promotion
Excitation of electrons to higher energy
If bonds are formed (lower energy) , excitation is worthwhile
4 σ-bonds
1 1
22 2
2s px py
1 1 1
12 2 2
2s px py pz
Hybridization
Description of methane is still incomplete
Three s-bond (H1s – C2p) + one s-bond (H1s – C2s)
Cannot explain symmetrical feature of methane molecules
Hybrid orbital
Interference between C2s + C2p orbital
Forming sp3 hybrid orbital
z y
x
z y
x
z y
x
z y
x
p p
p s h
p p
p s h
p p
p s h
p p
p s h
−
− +
=
− +
−
=
+
−
−
=
+ +
+
=
4 3 2 1
Hybridization
Formation of σ-bond in methane
) 1 ( ) 2 ( )
2 ( ) 1
( 1
1 A h A
h +
ψ =
sp 2 hybridization : ethylene
sp2 hybridization
y x
y x
x
p p
s h
p p
s h
p s
h
2 / 1 2
/ 1 3
2 / 1 2
/ 1 2
2 / 1 1
2) (3 2)
(3
2) (3 2)
(3 2
−
−
=
− +
= +
=
sp hybridization : acetylene
sp hybridization
z z
p s h
p s h
−
= +
=
2 1
Molecular Orbital Theory
Molecular Orbital (MO) Theory
Electrons should be treated as spreading throughout the entire molecule
The theory has been fully developed than VB theory
Approach :
Simplest molecule ( H2+ ion) complex molecules
The hydrogen molecule-ion
Hamiltonian of single electron in H2+
Solution : one-electron wavefunction
Molecular Orbital (MO)
The solution is very complicated function
This solution cannot be extended to polyatomic molecules
1 ) 1
( 1 4
2 0 1 1
2 2
1 r r R
V e m V
H
B A
e
− +
−
= +
∇
−
= πε
Attractions between electron and nuclei Repulsion between the nuclei
Linear Combination of Atomic Orbitals (LCAO-MO)
If an electron can be found in an atomic orbital belonging to atom A and also in an atomic orbital belonging to atom b, then overall
wavefuntion is superposition of two atomic orbital :
N : Normalization factor
Called a σ-orbital
( ) ( )
03 1/2/ 1
2 / 3 1 0 / 1
0 0
) (
a B e
a A e
B A N
a r S
H
a r S
H
B
B
A
A
ψ π ψ π ψ
−
−
±
=
=
=
=
±
= Linear Combination of
Atomic Orbitals (LCO-MO)
Normalization
( ) ( )
03 1/2/ 1
2 / 3 1 0 / 1
0 0
) (
a B e
a A e
B A N
a r S
H
a r S
H
B
B
A
A
ψ π ψ π ψ
−
−
±
=
=
=
=
±
=
{ }
56 . 0
59 . 0
) 2 1 1 ( 2
1
2 2
2 2
*
*
=
≈
=
+ +
= +
+
=
=
N
d AB S
S N
d AB d
B d
A N
d d
τ
τ τ
τ τ
ψ ψ
τ ψ ψ
{ }
10 . 1
59 . 0
) 2 1 1 ( 2
1
2 2
2 2
*
*
=
≈
=
− +
=
− +
=
=
N
d AB S
S N
d AB d
B d
A N
d d
τ
τ τ
τ τ
ψ ψ
τ ψ ψ ψ+
ψ−
LCAO-MO
Amplitude of the bonding orbital in hydrogen molecule-ion
rA and rBare not independent
{
r2 R2 2r Rcosθ}
1/2rB = A + − A
Bonding Orbital
Overlap density Crucial term
Electrons accumulates in the region where atomic orbital overlap and interfere constructively.
) 2 ( 2 2
2
2 = N A +B + AB
ψ+
Probability density if the electron were confined to the atomic orbital A
Probability density if the electron were confined to the atomic orbital B
An extra contribution to the density (Overlap density)
Bonding Orbital
The accumulation of electron density between the nuclei put the electron in a position where it interacts strongly with both nuclei
the energy of the molecule is lower than that of separate atoms
Bonding Orbital
Bonding orbital
called 1σ orbital
σ electron
The energy of 1σ orbital decreases as R decreases
However at small separation, repulsion becomes large
There is a minimum in potential energy curve
Re = 130 pm (exp. 106 pm)
De = 1.77 eV (exp. 2.6 eV)
Antibonding Orbital
Linear combination ψ- corresponds to a higher energy
Reduction in probability density between the nuclei (-2AB term)
Called 2σ orbital (often labeled 2σ *)
) 2 ( 2 2
2
2 = N A +B − AB
ψ−
Amplitude of antibonding orbital
Antibonding orbital
The electron is excluded from internuclear region
destabilizing
The antibonding orbital is more antibonding than the bonding orbital is
bonding
s H s
H E E
E
E− − 1 > + − 1
Molecular orbital energy diagram
The Structure of Diatomic Molecules
Target : Many-electron diatomic molecules
Similar procedure
Use H2+ molecular orbital as the prototype
Electrons supplied by the atoms are then
accommodated in the orbitals to achieve lowest overall energy
Pauli’s principle + Hund’s maximum multiplicity rule
Hydrogen and He molecules
Hydrogen (H2)
• Two electrons enter 1σ orbital
• Lower energy state than 2 H atoms
Helium (He)
• The shape is generally the same as H
• Two electrons enter 1σ orbital
• The next two electrons can enter 2σ* orbital
• Antibond is slightly higher energy than bonding
• He2 is unstable than the individual atoms
Bond order
A measure of the net bonding in a diatomic molecule
n : number of electrons in bonding orbital
n* : number of electrons in antibonding orbital
Characteristics
The greater the bond order, the shorter the bond
The greater the bond order, the greater the bond strength
) 2 (
1 *
n n
b = −
Period 2 diatomic molecules - σ orbital
Elementary treatments : only the orbitals of valence shell are used to form molecular orbital
Valence orbitals in period 2 : 2s and 2p
σ-orbital : 2s and 2pz orbital (cylindrical symmetry)
From an appropriate choice of c we can form four molecular orbital
z z
z
z A p B p B p
p A s
B s B s
A s
A c c c
c 2
ψ
2 2ψ
2 2ψ
2 2ψ
2ψ
= + + +Period 2 diatomic molecules - σ orbital
Because 2s and 2p orbitals have distinctly two different energies, they may be treated separately.
Similar treatment can be used
2s orbitals 1σ and 2σ*
2pz orbitals 3σ and 4σ*
s B s B s
A s
A c
c 2
ψ
2 2ψ
2ψ
= ±z z
z
z A p B p B p
p
A c
c 2
ψ
2 2ψ
2ψ
= +Period 2 diatomic molecules - π orbital
2p
x, 2p
z perpendicular to intermolecular axis
Overlap may be constructive or distructive
Bonding or antibonding π orbital
Two πx orbitals + Two πy orbitals
Period 2 diatomic molecules - π orbital
The previous diagram is based on the assumption that 2s and 2pz orbitals contribute to completely different sets
In fact, all four atomic orbitals
contribute joinlty to the four σ-orbital
The order and magnitude of energies change :
The variation of orbital energies of
period 2 homonuclear diatomics
The overlap integral
The extent to which two atomic orbitals on different atom overlaps : the overlap integral
ψA is small and ψB is large S is small
ψA is large and ψB is small S is small
ψA and ψB are simultaneously large S is large
• 1s with same nucleus S=1
• 2s + 2px S = 0
=
ψ ψ
dτ
S A* B
Structure of homonuclear diatomic molecule
Nitrogen
1σ2 2σ∗2 1π4 3σ2
b = 0.5*(2+4+2-2) = 3 Lewis Structure
Oxygen
1σ2 2σ∗2 3σ2 1π4 2π2∗
b = 0.5*(2+2+4-2-2) = 2
last two electrons occupy different orbital : πx and πy (parallel spin)
angular momentum (s=1)
Paramagnetic
: N N
: ≡
Quiz
What is spin-orbit coupling ?
What is the difference between sigma and pi bond ?
Explain symmetrical structure of methane molecule.
1 1
22 2
2s px py