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Development of cancer cell death inducer via interfering MFF-VDAC interaction

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Mitochondria regulate energy metabolism, biosynthesis, cell death, redox homeostasis and signaling pathway and dysregulated mitochondria observed abundantly in cancer. The mitochondrial fission factor (MFF) and the voltage-gated anion channel (VDAC) form a complex, which upon disruption activates mitochondrial outer membrane permeability (MOMP) and induces cell death. MFF peptide, synthetic MFF sequence peptide that competitively inhibits MFF and VDAC interaction, treatment leads to mitochondrial cell death in cancer but not in normal.

However, due to poor stability of peptide in vivo, it is necessary to develop new substance that induces cell death via interfering MFF-VDAC interaction as MFF peptide. We developed a chemical screening system to search for chemically interfering MFF-VDAC interaction using a nanobit protein-protein interaction assay system, which is a structural complementation reporter system. The chemical identified from this assay system could be a new anti-cancer drug that targets mitochondria to induce cancer cell death.

Background

  • Roles of mitochondria in cancer
  • Mitochondrial Outer Membrane Permeabilization (MOMP) : the door of programmed cell death
  • A Cancer Hallmark : Avoiding cell death
  • Targeting mitochondria for treatment of cancer
  • Figures

Death signaling activates Bax to make pores in the mitochondrial outer membrane through homo-oligomerization or hetero-oligomerization with Bax and VDAC (Figure 1.4). Cancer could avoid cell death, which is one of the hallmarks of cancer, by blocking MOMP in different ways. However, in the cancer cell, despite intrinsic lethal stimuli, Bax and Bak failed to form pores in several ways.

A way to avoid cell death is to upregulate anti-apoptotic proteins and inhibitor of apoptosis proteins. Also, downregulation and silencing of pro-apoptotic proteins prevent Bax and Bak from making pores (Figure 1.5). Thus, failure to form pores prevents MOMP, then cancer cell can ultimately avoid cell death in the presence of intrinsically lethal stimuli.

Recent research has revealed that mitochondria are dysregulated by overexpression of oncogenes and loss of function of tumor suppressor genes in cancer. Dysregulated mitochondria support initiation of tumorigenesis and tumor cell survival encountered harsh environment such as hypoxia, nutrient-deprived state, and metabolic stress.32 Some cancers are highly dependent on mitochondrial metabolism and inhibition of mitochondrial activity promotes suppression of cell proliferation and cell death.33 If the overcoming dysregulated mitochondria mechanism and vulnerabilities, targeting mitochondria may be a new therapeutic strategy.

Figure 1.1 Mitochondria support cancer at multiple stages  (2016). Mitochondria and Cancer
Figure 1.1 Mitochondria support cancer at multiple stages (2016). Mitochondria and Cancer

Development cancer cell death inducer via interfering MFF-VDAC interaction

Introduction

Materials and Methods

Protein lysate was prepared in radioimmunoprecipitation buffer (RIPA) (25 mM Tris-HCl/pH 7.6, 150 mM NaCl, 1% NP-40, 1% sodium deoxycholate, 1% SDS, Biomax) containing a cocktail proteinase inhibitors and phosphatase inhibitors. (100x, Thermo Fischer Scientific, 1861281). 5% (w/v) skim milk was used for blocking and the primary antibodies assayed were incubated overnight at 4°C. An IP buffer was prepared (50 mM Tris-HCl, pH 7.5, 150 mM NaCl, 1 mM EDTA) containing 1% CHAPS, EDTA-free protease inhibitor cocktail (Sigma-Aldrich), and PhosSTOP phosphatase inhibitor cocktail (Roche ).

The precipitates were washed five times with PBS, separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE), and the same process continued with western blotting. MFF and VDAC genes cloned into each pBiT vector using BiT-MFF primers (5'-CCGCTCGAGCGGTATGGCAGAAATTAGTCGAATTCAG-3' and 5'-CTAGCTAGCCTAGCGGC GAAACCAGAGCCA-3'), MFF-BiT primers (5'-CAATTGAAGGCTAG -5'-CATTGAAGCTAGCTAG- and 5'-CAATTGAAGCTAGCTAG-3' CCGCTCGAGCCGCGGAAACCAGAGCCAGCT-3'), BiT-VDAC primers (5'- CCGCTCGAGCGGTATGGCTGTCCACCACGTATGC-3' and 5'-CTAGCTAGCTTATGCTT GAAATTCCAGTCCTAG-3'), VDAC-BiT primers (5' CACCATGGAG3'-CCGTAGCTGGTA and 5'CACCATGGGCTGGT3'-CCGTAGCGTAG3'-CCGTAGCGT GGCTCGAGCCTGCTTGAAATTCCAGTCCTAGACC-3' ). Prepare the desired amount of reconstituted Nano-Glo® Live Cell Reagent by combining 1 volume of Nano-Glo®.

Live Cell Substrate with 19 volumes of Nano-Glo® LCS Dilution Buffer (a 20-fold dilution), creating a 5X stock to mix with cell culture medium.

Results

LgBiT-MFF and SmBiT-VDAC are the right combination to express the highest luminescent activity Since MFF peptide has several disadvantages, such as high production cost, in vivo instability, and low membrane permeability, it impairs its value as an anti-cancer drug. Therefore, we need to search for substance that disrupts the MFF-VDAC complex as MFF peptide and at the same time covers the disadvantages of MFF peptide. To search for the desired substance, we developed a chemical screening system using the Nanobit PPI assay, which system detects chemicals that disrupt MFF-VDAC interaction as MFF peptide in living cells (Figure 2.5A).

To build a chemical control system with the Nanobit PPI assay, the two subunits must interact with each other properly. However, since we do not know the structure of MFF and VDAC and how they interact, we must consider the possibilities of all subunit combinations. Thus, we produced the nanobit subunit-tagged protein plasmid and tuned the expression level of the nanobit-tagged proteins as similar as possible (Figure 2.5B) because we need to find the best combination that generates the highest luminescent activity in the same number of combinations.

Combinations assembled with VDAC-LgBit did not show up in data due to poor expression level. To distinguish which combination is the most suitable combination, the possibilities of all combinations were expressed in cells and the luminescent activity was measured. As a result, the combination of LgBiT-MFF and SmBiT-VDAC showed the highest activity over time than other combinations.

Therefore, we confirmed that LgBiT-MFF and SmBiT-VDAC are the most optimal combination for chemical screening system (Figure 2.5C). MFF Peptide Effectively Reduces Luminescent Activity Interferes with MFF-VDAC Interaction Because we determined the most optimal combination for screening, we need to confirm whether luminescent activity is decreased by MFF peptide treatment. Therefore, we measured luminescent activity of LgBiT-MFF and SmBiT-VDAC co-expressed in cell with treatment of MFF peptide (Figure 2.6A).

However, luminescent activities are dose-dependently reduced in MFF peptide-treated cells after 120 minutes (Figure 2.6C). Decreased TMRE staining in MFF peptide-treated cells suggests that interference with MFF-VDAC interaction induces MOMP (Figure 2.7A, B and C).

Discussion

Figures

Fluorescence microscopy images of Ct26- and B16F10-treated MFF peptide and FCCP show mitochondrial membrane potential by TMRE staining.

Figure 2.3 LgBiT-MFF and SmBiT-VDAC are proper combination to express highest luminescent  activity
Figure 2.3 LgBiT-MFF and SmBiT-VDAC are proper combination to express highest luminescent activity

The role of the mitochondrial electron transport chain in cell proliferation is to enable aspartate synthesis. Cross talk between mitochondrial ROS and depolarization in the potentiation of TRAIL-induced apoptosis in human tumor cells. The central role of amino acids in cancer redox homeostasis: vulnerabilities of the cancer redox code.

De novo synthesis of serine and glycine drives purine nucleotide biosynthesis in human lung cancer tissues.

수치

Figure 1.1 Mitochondria support cancer at multiple stages  (2016). Mitochondria and Cancer
Figure 1.2 Cancer cell mitochondrial metabolism in nutrient-deprived conditions  Created with BioRender.com
Figure 1.3 Mitochondrial outer membrane permeabilization induces cell death  (2012). Mitochondria and cell signalling
Figure 1.4 Bax makes pore in mitochondrial outer membrane via homo-oligomerization or  hetero-oligomerization with Bak and VDAC
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