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Retrospective evaluation of whole exome and genome mutation calls in 746 cancer samples

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Fig. 1 Work flow and sample inclusion statistics. a A workflow diagram illustrates the number of mutations present during each step (gradient) of the
Fig. 2 Landscape of mutations overlap by caller, sample and cancer type. a UpSetR 41 plot shows the variant calling set intersection by caller
Fig. 3 Recoverability simulation and effects of subclones on mutation concordance. a Observed recovery rate of PCAWG variants in MC3 (red) and of MC3 variants in PCAWG (blue), alongside sequencing noise simulations calculated from random draws of a binomia
Fig. 4 Screenshots of online tool MAFit. Here we display screenshots from the MAFit on-line interface
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